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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015922176.1_cds_XP_016470987.1_63379
CDS Infomation

[gene=LOC107793203] [db_xref=GeneID:107793203] [protein=E3 ubiquitin-protein ligase RGLG2-like] [protein_id=XP_016470987.1] [location=complement(join(8332..8412,8496..8552,8812..8992,9161..9288,9399..9504,9585..9664,10796..10893,10999..11112,11189..11329,11438..11522,12459..12686))] [gbkey=CDS]
Sequence

ATGGGTGGCAAGAGTTCAAAAAGATCAACAACTGGTCGATATGCATCATTTGGGTCCAGT
TCATATTCAGGTTATCAAGGCTATCCGCAGTCACCATATACTCAACCAAGCTACAATTAT
CCCCCGCCGCCTCCTTGTCAAACATATGGTGGTCCACCTCCTGAGTCAAGGAAAAGGCTT
GAGAGGAAATATTCTAAGATAGATGATGACTACCACAGCATAGAGCAGGTTACTGATGCC
CTTGCACGTGCCGGGCTAGAGTCTTCGAACTTAATTGTTGGCATTGATTTTACCAAGAGC
AATGAGTGGACTGGTGCAAGGTCATTCCACCGGAAAAGTTTGCATCACATTGGGGATCAG
CAAAATCCATATGAACAAGCAATATCCATCATTGGAAGAACACTATCAAAATTTGATGAG
GACAACCTGATTCCTTGTTTTGGATTTGGAGATGCCTCAACACATGACCAAGAAGTCTTT
GGTTTCTATCCGGATGACAAATATTGTAATGGATTCGAGGAAGTACTGAGTAGATATAGA
GAGTTGGTTCCTCAATTACGGCTTGCAGGACCAACATCATTTGCTCCTATTATTGAAATG
GCAATCACTATTGTTGAGCAGAGTGGCGGCCAGTACCACGTTTTATTGATAATAGCGGAT
GGACAGGTTACAAGAAGTGTAGATACTGAGCGCGGGCAATTTAGCCCTCAAGAGAAGAGA
ACAGTTGAAGCAATTGTGAAAGCAAGTGAATATCCCTTGTCTATTATTTTAGTTGGGGTT
GGAGATGGGCCATGGGACATGATGAGGGAATTTGATGACAATATCCCTGCTCGAGCCTTT
GACAATTTCCAGTTTGTTAATTTTACAGATATCATGTCAAAAACTGTGGACCGGTCCCGG
AAAGAAGCAGAGTTTGCCTTAGCAGCATTGATGGAAATACCTTCTCAGTACAAAGCAACT
CTGGAGCTGAACATTCTGGGTGCTCGTAGAGGAAATGAAATTGACAGGATTCCTCTCCCC
CCTCCGCACTATGGTGCAGCTTCTTTTGGCACATCAAAACCTTCACAAAGCAATAGTTAC
CGTCCGAGTGCGCCTACTAGCACTAGCAGACACAATTCGGCTGTTGGATCAAGTCATCCT
GCAAGTTCTGCAGATAATCATCTTTGTCCCATCTGCATAACCAATCCAAAGGACATGGCA
TTTGGTTGTGGACACCAGACATGTTGTGAATGTGGGCAAGATCTGCAGTTGTGCCCGATC
TGTCGGGACAGCATTCAAACTAGGATAAGACTTTACTGA

Peptide Sequence

PEP ID

XP_016470987.1
PEP Infomation

PREDICTED: E3 ubiquitin-protein ligase RGLG2-like [Nicotiana tabacum]
Sequence

MGGKSSKRSTTGRYASFGSSSYSGYQGYPQSPYTQPSYNYPPPPPCQTYGGPPPESRKRL
ERKYSKIDDDYHSIEQVTDALARAGLESSNLIVGIDFTKSNEWTGARSFHRKSLHHIGDQ
QNPYEQAISIIGRTLSKFDEDNLIPCFGFGDASTHDQEVFGFYPDDKYCNGFEEVLSRYR
ELVPQLRLAGPTSFAPIIEMAITIVEQSGGQYHVLLIIADGQVTRSVDTERGQFSPQEKR
TVEAIVKASEYPLSIILVGVGDGPWDMMREFDDNIPARAFDNFQFVNFTDIMSKTVDRSR
KEAEFALAALMEIPSQYKATLELNILGARRGNEIDRIPLPPPHYGAASFGTSKPSQSNSY
RPSAPTSTSRHNSAVGSSHPASSADNHLCPICITNPKDMAFGCGHQTCCECGQDLQLCPI
CRDSIQTRIRLY

Transcript Sequence

Gene sequence data has not been registered.